PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS722800.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 270aa    MW: 31049.2 Da    PI: 9.8469
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS722800.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM131.27.7e-41111441128
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                   lp+G rF+Pt+eelv++yLk k+ g+k  + ++i+evd++++ PwdLp+      +++++ + w+fF++ ++ky+++kr++r+ ++g Wk tg++++
  EcS722800.10  11 LPVGWRFRPTEEELVNHYLKLKILGDKKVE-KIIPEVDVHQLPPWDLPSkinelsSINSDGDGWFFFCRLQNKYPQSKRTRRTNDHGSWKPTGENRK 106
                   799**********************99555.89***************53676666666888*********************************** PP

           NAM  92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   + ++ k++  glkk+Lvf k ++pk  +t+Wv+hey++
  EcS722800.10 107 IRTQdKKKILGLKKILVFKKHQSPKNAQTRWVLHEYHI 144
                   **99666779**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.55E-457165IPR003441NAC domain
PROSITE profilePS5100542.85811167IPR003441NAC domain
PfamPF023652.1E-2212144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MESTDISLVD LPVGWRFRPT EEELVNHYLK LKILGDKKVE KIIPEVDVHQ LPPWDLPSKI  60
NELSSINSDG DGWFFFCRLQ NKYPQSKRTR RTNDHGSWKP TGENRKIRTQ DKKKILGLKK  120
ILVFKKHQSP KNAQTRWVLH EYHINADLMD NTLNDQSDFV LYHLKQNLNQ GKTNSKTKKT  180
KKSVTVKPQE SNRSSCRAPD EVNETSFSIM PQEGSRSMCN TPNEVNETSF SIMPQEGSRS  240
MCNTPNEVNN TSCTNPLVTA KSIVPREIPK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-26914413140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029942.11e-160PREDICTED: protein NTM1-like 9 isoform X1
TrEMBLA0A059DC641e-114A0A059DC64_EUCGR; Uncharacterized protein
STRINGXP_010029942.11e-159(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19821971
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.13e-36NAC transcription factor-like 9