PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS724721.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 111aa    MW: 12723.3 Da    PI: 9.5766
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS724721.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.71.2e-1567653128
           NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   ++ +e++fF++r +k      ++r+t+ g+Wk+t +++ + +  +ge++gl++ Lv++kgr++++++t+  m ey+l
  EcS724721.10   6 SDGSECFFFCPRGRK------RKRKTECGFWKETYSKRVIQAPdTGEEIGLRRGLVYHKGRQRNSQRTNLGMTEYHL 76 
                   467899*****9885......578899*********999999888999****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.084196IPR003441NAC domain
SuperFamilySSF1019416.02E-17681IPR003441NAC domain
PfamPF023652.4E-91176IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
LSSIPSDGSE CFFFCPRGRK RKRKTECGFW KETYSKRVIQ APDTGEEIGL RRGLVYHKGR  60
QRNSQRTNLG MTEYHLNLNV SDSEISDPVL DFSSFASPNL ASLTWLKYSL N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11823RKRKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041979.12e-52PREDICTED: protein NTM1-like 9
TrEMBLA0A059BBR28e-52A0A059BBR2_EUCGR; Uncharacterized protein
STRINGXP_010041979.16e-52(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16613212
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-13NAC transcription factor-like 9