PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS724722.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 170aa    MW: 19713.4 Da    PI: 8.3108
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS724722.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM93.14.6e-2991352128
           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                   p+G+rF+Pt++el++++L+kk++g+  ++  vi+e+ iy++eP +L +      ++ ++ +e++fF++r +k      ++r+t+ g+Wk+t +++ +
  EcS724722.10   9 PVGLRFKPTENELISHHLTKKLKGEMETI-CVIPELYIYNWEPPELFArykelsSIPSDGSECFFFCPRGRK------RKRKTECGFWKETYSKRVI 98 
                   89**********************99777.78**************743455544455888*******9886......578899*********9999 PP

           NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +  +ge++gl++ Lv++kgr++++++t+  m ey+l
  EcS724722.10  99 QAPdTGEEIGLRRGLVYHKGRQRNSQRTNLGMTEYHL 135
                   99888999****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.98E-306140IPR003441NAC domain
PROSITE profilePS5100528.5638155IPR003441NAC domain
PfamPF023651.3E-189135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MAESTEAWPV GLRFKPTENE LISHHLTKKL KGEMETICVI PELYIYNWEP PELFARYKEL  60
SSIPSDGSEC FFFCPRGRKR KRKTECGFWK ETYSKRVIQA PDTGEEIGLR RGLVYHKGRQ  120
RNSQRTNLGM TEYHLNLNVS DSEISDPVLD FSSFASPNLA SLTWLKYSLN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-1421359140Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17782RKRKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041979.15e-96PREDICTED: protein NTM1-like 9
TrEMBLA0A059BBR22e-95A0A059BBR2_EUCGR; Uncharacterized protein
STRINGXP_010041979.12e-95(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3517322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-27NAC transcription factor-like 9