PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS725456.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 40aa    MW: 4942.63 Da    PI: 11.6212
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS725456.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.11.7e-077292346
                     -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                     +W++Ia+++  g t++++k++w++
     EcS725456.10  7 RWAAIASRLH-GTTDNEIKNYWNT 29
                     5*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.09E-6637IPR009057Homeodomain-like
PfamPF002497.9E-6729IPR001005SANT/Myb domain
CDDcd001670.00126731No hitNo description
Gene3DG3DSA:1.10.10.601.5E-10732IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 40 aa     Download sequence    Send to blast
FHFSRYRWAA IASRLHGTTD NEIKNYWNTR LKKRFLKSQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37780.19e-12myb domain protein 87