PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS730127.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 197aa    MW: 21104.7 Da    PI: 4.904
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS730127.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-182370253
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                  +++GVr +k +grWv+eIr p++   r r++lg+++t+e+Aa+a +aa+ +l
  EcS730127.10 23 KFRGVRKRK-WGRWVSEIRLPNS---RERIWLGSYDTPEKAARAFDAAAFCL 70
                  79****999.**********933...5**********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.4E-302386IPR001471AP2/ERF domain
CDDcd000186.69E-182380No hitNo description
PfamPF008471.4E-112370IPR001471AP2/ERF domain
PROSITE profilePS5103221.7862380IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-192381IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.1E-282380IPR001471AP2/ERF domain
PRINTSPR003672.3E-92435IPR001471AP2/ERF domain
PRINTSPR003672.3E-94662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MTKRSEAKAA AVHEGEGARS ELKFRGVRKR KWGRWVSEIR LPNSRERIWL GSYDTPEKAA  60
RAFDAAAFCL GRPAAKLNFP GSLPEIPGAA SLSPDEIQSA AASYANLGAV AVPAPSPSLS  120
ASEASSVLTT ESDLTLDLSF LDFLDDSGPV SGEPHLGKFP GVEEAPDVFY HMQFPSVESA  180
GLNLDTLLAS DSFPWRI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1423801472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010051400.11e-114PREDICTED: ethylene-responsive transcription factor ERF017
TrEMBLA0A059CUB12e-92A0A059CUB1_EUCGR; Uncharacterized protein
STRINGXP_010051400.11e-114(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16142890
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-31ERF family protein