PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS731436.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 123aa    MW: 14466.5 Da    PI: 9.7956
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS731436.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B367.61.8e-2126116298
                   EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
            B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                    + + +s v k + l +p kfa+eh +   + + ++l+d +g++W+v +    +++r+++++GW+ F  +n+Lk gD+++F++  r+++e +v+++r
  EcS731436.10  26 MSYMRRSTVEKAKPLPVPSKFAKEHFLW--RRTNIVLRDAEGQTWKVAH--HCNGKRHYFSRGWQAFLYDNELKIGDVCIFEV--RNKEEVRVHIYR 116
                   56677899999999***********877..4457***************..7777889************************5..356667999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.45E-2618117IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.1E-2718116IPR015300DNA-binding pseudobarrel domain
CDDcd100171.51E-2023116No hitNo description
PROSITE profilePS5086315.28425118IPR003340B3 DNA binding domain
SMARTSM010193.2E-925118IPR003340B3 DNA binding domain
PfamPF023626.5E-1925116IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
NASTSEENAR LEAVKETFTS DFPFFMSYMR RSTVEKAKPL PVPSKFAKEH FLWRRTNIVL  60
RDAEGQTWKV AHHCNGKRHY FSRGWQAFLY DNELKIGDVC IFEVRNKEEV RVHIYRLPGT  120
SAI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010030658.22e-82PREDICTED: putative B3 domain-containing protein Os03g0621600
TrEMBLA0A059APE44e-81A0A059APE4_EUCGR; Uncharacterized protein
STRINGXP_010030658.13e-82(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2065625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-11B3 family protein