PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcS736730.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

YABBY

Protein Properties

Length: 68aa MW: 8266.79 Da PI: 8.6723

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcS736730.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	34.1	9.3e-11	2	38	2	37
YABBY 2 dvfssseqvCyvqCnfCntilavs.vPstslfkvvtv 37 +v +se+vCyv+CnfCntilav+ +P++ l++ v EcS736730.10 2 SVEMASERVCYVHCNFCNTILAVTpLPHSVLLTSNFV 38 78899*****************974677776665555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04690	2.4E-8	6	40	IPR006780	YABBY protein

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0007275	Biological Process	multicellular organism development

Sequence ? help Back to Top
Protein Sequence Length: 68 aa Download sequence Send to blast
MSVEMASERV CYVHCNFCNT ILAVTPLPHS VLLTSNFVFC FFFFFFFFFY PFFFPRSRMR 60 KIASFEFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	1e-09	YABBY family protein