PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS737708.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family FAR1
Protein Properties Length: 337aa    MW: 38907.4 Da    PI: 7.1469
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS737708.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR164.23.7e-2035118390
          FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                   Y +YA   GF vrksk +k+ ++geit+rtfvC++eg++ +++++  +++ ++ e r+gC a ++ k e +g +ev++ + +HnHe+ 
  EcS737708.10  35 YVAYAIGKGFGVRKSKIRKN-DKGEITRRTFVCNCEGYAINSSDQ--ERKYEKLEVRCGCPAFIRFKVE-NGSYEVIDYVPKHNHEFI 118
                   99**************9999.8888**************999877..8888999**************9.****************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.0E-1835118IPR004330FAR1 DNA binding domain
PfamPF105511.5E-32240334IPR018289MULE transposase domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0004807Molecular Functiontriose-phosphate isomerase activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
HETTDLSHVI RDLEKDFEFT IGMVFASELE AYHKYVAYAI GKGFGVRKSK IRKNDKGEIT  60
RRTFVCNCEG YAINSSDQER KYEKLEVRCG CPAFIRFKVE NGSYEVIDYV PKHNHEFIPE  120
HQRHLIRCGR MISDTCKGVL VDMAKAGIGG TTAYKFLANE AGGSQNLGFI LRDCQNFLQG  180
ERLNYIEGGD CQSLLNHFHC MQMQNPMFFY AQQVDQDGRL TNLFWRDSLS KFDYDCFGDV  240
MVFDTTYRTN MYSLICAPFV GVNHHWKNTL FGCAFLLDET ADSFIWLFEV FLKSMGNKAP  300
KTIFTDQDHA MAKVIQIVFP NTQHRLCTWH IEKNANK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010056981.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A059C3I90.0A0A059C3I9_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010056981.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1499737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-69FAR1-related sequence 5