PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS750683.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 245aa    MW: 27703.3 Da    PI: 9.2367
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS750683.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.22.4e-09123164351
           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                    +GV++  k+ +W A I++      +k+++lg+    e+Aa+++++a+ 
  EcS750683.10 123 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVSCQEDAARLYDRAAF 164
                   79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.0E-4122179IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-7123167IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.3E-6125169IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MVSLRRRKLL GLCSGKASFL APLPKSSDGH ANDTPNQNAK LVTVHPLPLD DVKPPEEVRT  60
TWCLHLLYVI DQKILAKIGS MSSNISGSSS SKEPHNQDFS GQAIKRRKRH RRKHHHNQEP  120
CLMRGVYFKN MKWQAAIKVD KKQIHLGTVS CQEDAARLYD RAAFMCGREP NFELSEEEKQ  180
ELTKLSWDEF LARTRHAITN KKHKRRVGAG SEKKSEPEPE IGDWDGEEAN SLSGSEEVEP  240
DTSVS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036790.11e-143PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_010036791.11e-143PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_010036792.11e-143PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_010036793.11e-143PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A059A3Z81e-142A0A059A3Z8_EUCGR; Uncharacterized protein
STRINGXP_010036790.11e-143(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61892646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.18e-48ERF family protein