PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS755021.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family CPP
Protein Properties Length: 64aa    MW: 7235.98 Da    PI: 7.2076
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS755021.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR253.8e-081251742
           TCR 17 YCeCfaagkkCseeCkCedCkNkeek 42
                  YCeCfa+g +C++ C+C++C+N+ee+
  EcS755021.10  1 YCECFASGIYCDK-CNCSNCHNNEEN 25
                  ************9.*********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036381.3E-5123IPR005172CRC domain
SMARTSM011140.0076125IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163415.901164IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 64 aa     Download sequence    Send to blast
YCECFASGIY CDKCNCSNCH NNEENEAARR EAVEATLERN PNAFRPKIAS SPHGPRDRRV  60
GTLY
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010050570.18e-35PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X1
RefseqXP_018726006.18e-35PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X2
SwissprotQ9SL703e-27TCX6_ARATH; Protein tesmin/TSO1-like CXC 6
TrEMBLA0A059CP022e-33A0A059CP02_EUCGR; Uncharacterized protein
STRINGXP_010050570.13e-34(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20110.17e-17Tesmin/TSO1-like CXC domain-containing protein