PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS756445.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 121aa    MW: 13188.8 Da    PI: 10.8645
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS756445.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.25.5e-15554255
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  +y GV  ++++ r+ AeIrdp++ng  k+++lg+fgt  +Aa+a+++ +++++g
  EcS756445.10  5 HYIGV--RPRSRRFGAEIRDPNQNG--KKVWLGTFGTDIDAAEAYDRKALEFRG 54
                  68999..58899*********8887..************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.0E-22463IPR001471AP2/ERF domain
PROSITE profilePS5103217.029562IPR001471AP2/ERF domain
CDDcd000186.10E-17562No hitNo description
SuperFamilySSF541712.62E-16564IPR016177DNA-binding domain
PfamPF008479.3E-8554IPR001471AP2/ERF domain
SMARTSM003805.5E-22568IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
DEQRHYIGVR PRSRRFGAEI RDPNQNGKKV WLGTFGTDID AAEAYDRKAL EFRGSKAILN  60
FPLEAGKRAD GKKRPQETTA ARADGKKRRQ ETTPRGGGGG GGGGDNKVIV NKEKVKGDLA  120
P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-19463464ATERF1
3gcc_A2e-19463464ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17188KKRPQETTAARADGKKRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041307.11e-38PREDICTED: ethylene-responsive transcription factor ERF095-like
TrEMBLA0A218XP068e-25A0A218XP06_PUNGR; Uncharacterized protein
STRINGXP_010041307.15e-38(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-25ERF family protein