PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS756720.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 144aa    MW: 16526.8 Da    PI: 4.5178
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS756720.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.52.1e-131911712128
           NAM  12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvf 108
                   eel  +++   ++++ +++ +vi++v+ +++ P++Lp      e+ wyf           + +nr ++ g+W   g+ +e++  +    g  +t  f
  EcS756720.10  19 EELF-KFMFCMARADFFPA-NVITDVNPFNCLPETLP------ENTWYFTN---------SMENRGAEGGFWMPRGEAREIFG-DAFINGWEETHEF 97 
                   5555.55666666666777.89**************9......46788743.........356898899**************.9999********* PP

           NAM 109 ykgrapkgektdWvmheyrl 128
                   y+gr pk ekt+W+m ey +
  EcS756720.10  98 YEGRGPKVEKTNWLMLEYYM 117
                   ******************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.8318133IPR003441NAC domain
SuperFamilySSF1019412.09E-1825123IPR003441NAC domain
PfamPF023653.1E-632116IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MCPPAVAPLF DIKNISSNEE LFKFMFCMAR ADFFPANVIT DVNPFNCLPE TLPENTWYFT  60
NSMENRGAEG GFWMPRGEAR EIFGDAFING WEETHEFYEG RGPKVEKTNW LMLEYYMTSK  120
VSGAALSAKV LPEFHVVYTN SLMH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060915.11e-92PREDICTED: NAC domain-containing protein 79
TrEMBLA0A059BPI22e-90A0A059BPI2_EUCGR; Uncharacterized protein
STRINGXP_010060915.14e-92(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137081023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.12e-17NAC domain containing protein 58