PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS764989.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 238aa    MW: 25151.1 Da    PI: 4.6982
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS764989.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP269.55.8e-2299148255
           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   +y+GVr+++ +g+W+AeIrdp+    r +r++lg+f+taeeAa+a+++a+ +++g
  EcS764989.10  99 RYRGVRQRP-WGKWAAEIRDPR----RgARVWLGTFDTAEEAARAYDNAAIEFRG 148
                   7********.**********83....46************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.2E-1699148IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.0E-3499156IPR001471AP2/ERF domain
SMARTSM003803.1E-4199162IPR001471AP2/ERF domain
PROSITE profilePS5103225.8799156IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-2499157IPR016177DNA-binding domain
CDDcd000185.74E-3399158No hitNo description
PRINTSPR003671.4E-12100111IPR001471AP2/ERF domain
PRINTSPR003671.4E-12122138IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0050832Biological Processdefense response to fungus
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
VATLAEVISG TPSARSGSGE DPAGPASGSG GLVTCRECGI EGCLGCSYFP PTLERGGASS  60
SQAEASSMHG QSASNAAGGS GHAPGAADAS QEYGARKNRY RGVRQRPWGK WAAEIRDPRR  120
GARVWLGTFD TAEEAARAYD NAAIEFRGPR AKLNFPVVDH SLWESSAPSL LERREITPNE  180
SEQYPETERA PAEAEQGNAR GSELWEVFGD DEMQQWMTTI GFGSDHSSDS SNGNGHSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-2395157164ATERF1
3gcc_A1e-2395157164ATERF1
5wx9_A2e-2394156972Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00469DAPTransfer from AT4G34410Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010068468.11e-169PREDICTED: ethylene-responsive transcription factor ERF109-like
STRINGXP_010068468.11e-168(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.19e-26redox responsive transcription factor 1