PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS775174.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WOX
Protein Properties Length: 189aa    MW: 21342.3 Da    PI: 10.0265
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS775174.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.48e-213091157
                  TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
      Homeobox  1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                  ++ R+++t+eq+++L +lF++  r+ps++++++++++l    +++ ++V++WFqN++a+e++
  EcS775174.10 30 KCGRWNPTTEQVKVLTDLFRSgLRTPSTDQIQKISTQLsfygKIESKNVFYWFQNHKARERQ 91
                  568*****************99**************************************97 PP
2Wus_type_Homeobox114.74.5e-373093265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+
       EcS775174.10 30 KCGRWNPTTEQVKVLTDLFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKR 93
                       678***********************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.9162792IPR001356Homeobox domain
SMARTSM003895.4E-42996IPR001356Homeobox domain
PfamPF000468.0E-183191IPR001356Homeobox domain
SuperFamilySSF466899.84E-123294IPR009057Homeodomain-like
CDDcd000861.54E-43393No hitNo description
Gene3DG3DSA:1.10.10.603.5E-83391IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEEGMSGFYV KAAGVRGGHG GGNGGSGGTK CGRWNPTTEQ VKVLTDLFRS GLRTPSTDQI  60
QKISTQLSFY GKIESKNVFY WFQNHKARER QKRRKVSVDD QTKEALRSEE KISSAKRTHF  120
YPPSKPYPIS RASSTSCVSI QHHISDINIS YLTDKVTHRE NTTYRSVFII IIIPIIISSH  180
CCCYYIIIT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010067503.11e-66PREDICTED: WUSCHEL-related homeobox 7
TrEMBLA0A059BHR33e-65A0A059BHR3_EUCGR; Uncharacterized protein
STRINGXP_010067503.15e-66(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM40142857
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11260.11e-41WUSCHEL related homeobox 5