PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcS778332.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

GRAS

Protein Properties

Length: 119aa MW: 13467.5 Da PI: 10.7033

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcS778332.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	24.5	3.1e-08	52	118	294	360
GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360 i n +c+g+er++r +t++ r r +aGF+ ++l++++++ ak l+ ++ + +++eee ++l++ EcS778332.10 52 IGNGASCKGSERIKRAKTYKMSRVRNLRAGFRRLSLNKDTVSLAKGGLKSYYHKDFEIEEEGQWLLQ 118 677789********************************************888*****99986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03514	1.1E-5	52	118	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 119 aa Download sequence Send to blast
FQNILNETVD SPRDAMLNLI RKMNPNVFIQ GVKNGGHVSP FLPLDPRRCS SIGNGASCKG 60 SERIKRAKTY KMSRVRNLRA GFRRLSLNKD TVSLAKGGLK SYYHKDFEIE EEGQWLLQG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010032389.1	6e-40	PREDICTED: scarecrow-like protein 9
TrEMBL	A0A059ADH9	1e-38	A0A059ADH9_EUCGR; Uncharacterized protein
STRING	XP_010032389.1	2e-39	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07530.1	2e-26	SCARECROW-like 14