PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcS785373.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

VOZ

Protein Properties

Length: 388aa MW: 43437.7 Da PI: 4.6976

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcS785373.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	360.2	7.8e-111	203	388	1	186
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfd 97 pppsaflgpkcalwdc+rpaqgsew+ dycs++ha+lal eg+pg++pvlrp+gi+lkd+ l+++l+ak+qgk+vgipec+gaa +kspwna++lfd EcS785373.10 203 PPPSAFLGPKCALWDCQRPAQGSEWCLDYCSTMHADLALSEGSPGMNPVLRPGGIGLKDDRLLSSLMAKMQGKNVGIPECHGAAIEKSPWNASKLFD 299 89********************************************************************************************* PP VOZ 98 lsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrle 186 lsllege irewlffdkprrafesgnrkqrsl dysgrgwhesrkq+mke+gg+krsyymdpqp++sfewhl+eye++++ ++aly+le EcS785373.10 300 LSLLEGENIREWLFFDKPRRAFESGNRKQRSLSDYSGRGWHESRKQLMKELGGHKRSYYMDPQPPGSFEWHLFEYEVTSSGSCALYKLE 388 *************************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence Send to blast
MDSETKIKRE ATTQPQLSEK ARKLIDDIPE IMTNCQLAWK GGRTGDSTVL VEQLLRLLSD 60 LKAEINASSP ASPIPVDSLG SFSEEIQRML RVCDEQDDAT STLVELAGLK PAPEIEGFQI 120 TNFKTAQETD FLNFEQQGLG SQEFYQCGID LGMHNTVVND SDQLDYLHFD FHQDDEHGHY 180 GETNNDKQIG HDFGANILPL VNPPPSAFLG PKCALWDCQR PAQGSEWCLD YCSTMHADLA 240 LSEGSPGMNP VLRPGGIGLK DDRLLSSLMA KMQGKNVGIP ECHGAAIEKS PWNASKLFDL 300 SLLEGENIRE WLFFDKPRRA FESGNRKQRS LSDYSGRGWH ESRKQLMKEL GGHKRSYYMD 360 PQPPGSFEWH LFEYEVTSSG SCALYKLE

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence Send to blast

MDSETKIKRE ATTQPQLSEK ARKLIDDIPE IMTNCQLAWK GGRTGDSTVL VEQLLRLLSD  60
LKAEINASSP ASPIPVDSLG SFSEEIQRML RVCDEQDDAT STLVELAGLK PAPEIEGFQI  120
TNFKTAQETD FLNFEQQGLG SQEFYQCGID LGMHNTVVND SDQLDYLHFD FHQDDEHGHY  180
GETNNDKQIG HDFGANILPL VNPPPSAFLG PKCALWDCQR PAQGSEWCLD YCSTMHADLA  240
LSEGSPGMNP VLRPGGIGLK DDRLLSSLMA KMQGKNVGIP ECHGAAIEKS PWNASKLFDL  300
SLLEGENIRE WLFFDKPRRA FESGNRKQRS LSDYSGRGWH ESRKQLMKEL GGHKRSYYMD  360
PQPPGSFEWH LFEYEVTSSG SCALYKLE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010052424.1	0.0	PREDICTED: transcription factor VOZ1 isoform X1
Refseq	XP_018731294.1	0.0	PREDICTED: transcription factor VOZ1 isoform X1
Refseq	XP_018731297.1	0.0	PREDICTED: transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	1e-125	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A059DH99	0.0	A0A059DH99_EUCGR; Uncharacterized protein
STRING	XP_010052424.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM11060	25	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-127	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]