PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A00362.1.p
Common NameEUGRSUZ_A00362
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 133aa    MW: 15421.9 Da    PI: 10.4352
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A00362.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.31.4e-23210813115
               NAM  13 elvveyLkkkvegkkleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                       elv++yLk   +++    e++i+evd++++ PwdLp k     ++k + +ew+fFs+ ++ky+++kr +r+ + g Wk tgk +++ ++ +++
  Eucgr.A00362.1.p   2 ELVNQYLKTLGNETV---EQIIPEVDVHQLPPWDLPgKinelsRIKLDGDEWFFFSRLQNKYPQSKRVRRTNDYGSWKPTGKPHKIRTQdRKN 91 
                       9******76443333...368***************44677766666889************************************9997788 PP

               NAM  99 lvglkktLvfykgrapk 115
                       + glkk+Lvf + + pk
  Eucgr.A00362.1.p  92 TLGLKKILVFKNVKVPK 108
                       8*********9877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023652.4E-81107IPR003441NAC domain
PROSITE profilePS5100524.2241132IPR003441NAC domain
SuperFamilySSF1019411.16E-212102IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
DELVNQYLKT LGNETVEQII PEVDVHQLPP WDLPGKINEL SRIKLDGDEW FFFSRLQNKY  60
PQSKRVRRTN DYGSWKPTGK PHKIRTQDRK NTLGLKKILV FKNVKVPKML IPNGYCMNTV  120
SSMIRVTSFF TA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-16110826127Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A00362.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064391.11e-63PREDICTED: protein NTM1-like 9
RefseqXP_010064501.11e-63PREDICTED: protein NTM1-like 9
RefseqXP_018725712.11e-63PREDICTED: protein NTM1-like 9
TrEMBLA0A059DCN33e-93A0A059DCN3_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010064391.14e-63(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.28e-23NAC 014