PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A01091.1.p
Common NameEUGRSUZ_A01091, LOC104435021
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 226aa    MW: 24654.7 Da    PI: 8.5043
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A01091.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79.1e-212978255
               AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++GVr+++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a+++a+++l+g
  Eucgr.A01091.1.p 29 RFRGVRRRP-WGRFAAEIRDpWK----KARIWLGTFDSAEDAARAYDEAALSLRG 78
                      69*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.4E-312986IPR001471AP2/ERF domain
PfamPF008471.3E-132978IPR001471AP2/ERF domain
CDDcd000185.60E-302986No hitNo description
SuperFamilySSF541711.5E-222987IPR016177DNA-binding domain
PROSITE profilePS5103223.6962986IPR001471AP2/ERF domain
SMARTSM003801.2E-362992IPR001471AP2/ERF domain
PRINTSPR003674.4E-103041IPR001471AP2/ERF domain
PRINTSPR003674.4E-105268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MPETGPAATA ADPIPTTQNF PDSAQREHRF RGVRRRPWGR FAAEIRDPWK KARIWLGTFD  60
SAEDAARAYD EAALSLRGPK AKTNFPLDPL TGLPQAAPSP AALLPRPRPR PRPRGRRRRG  120
PPAEDFHVNR PTSSSLSSTV ESYSGPRVSH PAPAVPRVVA VPRAPPEDCR SDCDSSSSVI  180
DDVDDCCVLA PSCFRRALQF DLNLPPPLED ADLDGEELRA TALRL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-2127921178Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107117RPRPRPRGRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00194DAPTransfer from AT1G50640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A01091.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010046158.11e-157PREDICTED: ethylene-responsive transcription factor 3
TrEMBLA0A059DEA21e-156A0A059DEA2_EUCGR; Uncharacterized protein
STRINGXP_010046158.11e-157(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.11e-14ethylene responsive element binding factor 3