PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A01418.2.p
Common NameEUGRSUZ_A01418
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRF
Protein Properties Length: 410aa    MW: 44511.9 Da    PI: 9.3988
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A01418.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.61.2e-24130173144
               WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                       d+epgrC+RtDGKkWRCsr+v +++k+CErHlhrgr rsrk++e
  Eucgr.A01418.2.p 130 DPEPGRCKRTDGKKWRCSREVAPDQKYCERHLHRGRPRSRKPVE 173
                       79***************************************987 PP
2QLQ57.93e-2072105235
               QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 
                       +FT+aQ+ +L++Q+++yKy++a++PvP+eLl +i
  Eucgr.A01418.2.p  72 PFTHAQWKELERQAMIYKYMMASVPVPAELLIPI 105
                       9******************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009515.6E-1371107IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.3E-1472105IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166620.48972107IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.379130174IPR014977WRC domain
PfamPF088795.0E-21131173IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MMVHHENHHG GGGGPAGGAF PNVFLIPSDV SGGARGDNGG LGGGFVRSVQ PYDMASTVHT  60
AFKSPGAMLA YPFTHAQWKE LERQAMIYKY MMASVPVPAE LLIPILTPRD GLSRYPFGNG  120
YGLRYSSNGD PEPGRCKRTD GKKWRCSREV APDQKYCERH LHRGRPRSRK PVELHPSVSK  180
KTRLLHQPSP LPKTEDPSMF LQKPSQSSHS LESPLKEARN TDWLMIGESS PVPMLDQQQW  240
PSYPSGEIHH FGKNQYFLNS NSLPLDKPKI ENPKGFIDAW SSSVSAGNNS RCSVSSDENI  300
SLSSLTLSVG GNNSIQDEMG RAHLGFSVLD SYRNPSKSHS HATWLGSNSW ISSTPGGPLA  360
EVLGPGVLHR TLASLSDSSG GSSPTPSSSM VRSEITLKWF NPNKLASSD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A01418.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018729589.10.0PREDICTED: growth-regulating factor 7 isoform X3
TrEMBLA0A059DFA80.0A0A059DFA8_EUCGR; Uncharacterized protein
STRINGXP_010048632.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53660.15e-47growth-regulating factor 7