PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A01921.1.p
Common NameEUGRSUZ_A01921
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 172aa    MW: 19053.9 Da    PI: 4.5356
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A01921.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.47.9e-29107157252
           G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 
                       prlrWtpeLH +Fv+ave+LGG+ekAtPk +l+lm+v gL+++hvkSHLQ 
  Eucgr.A01921.1.p 107 PRLRWTPELHLAFVHAVERLGGQEKATPKLVLQLMNVRGLSIAHVKSHLQV 157
                       8*************************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.162103163IPR017930Myb domain
Gene3DG3DSA:1.10.10.609.4E-27103157IPR009057Homeodomain-like
SuperFamilySSF466891.79E-13105157IPR009057Homeodomain-like
TIGRFAMsTIGR015575.0E-21107159IPR006447Myb domain, plants
PfamPF002494.9E-9108158IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MTDDRIEISD EDKSDGGFSN VQYKTNSSDS CDQKCLSFDL NEAADIENDE NGLSADEDAD  60
SLSNNEYNLD EAASSKVDSS SGNNNCSSDE GKERTTTVRQ YMRSKMPRLR WTPELHLAFV  120
HAVERLGGQE KATPKLVLQL MNVRGLSIAH VKSHLQVLQH KNMDKEIILS S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-18108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-18108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A9e-19108156351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B9e-19108156351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C9e-19108156351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D9e-19108156351Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-18108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-18108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-18108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-18108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-18108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-18108156452Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A01921.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010052783.11e-102PREDICTED: two-component response regulator ORR24
RefseqXP_018731391.11e-102PREDICTED: two-component response regulator ORR24
TrEMBLA0A059DGQ41e-123A0A059DGQ4_EUCGR; Uncharacterized protein
STRINGXP_010052783.11e-102(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM36328184
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-33G2-like family protein