PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A02413.1.p
Common NameEUGRSUZ_A02413, LOC104445453
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 380aa    MW: 41680.6 Da    PI: 5.1875
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A02413.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.2e-09191238455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++iN ++  L+el+P +    sk    a++L + +++++sLq
  Eucgr.A02413.1.p 191 SHSLAERARREKINARMKLLQELVPGC----SKISGTASVLDEIINHVQSLQ 238
                       8*************************9....788999**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.88E-15185256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.63E-9185242No hitNo description
Gene3DG3DSA:4.10.280.106.8E-15187254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.053187237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-7191238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-9193243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MEPSSLTLAG STDAALESVL TEEIRSLMAP PPESTSSFTA LLELPRTRAI ELLHSPEAPN  60
SPGVAVPGGP AGTPLRRLGG DGGGGFALAV GSDLAARYPA LFGEKNDSVE TSSQKVKSEP  120
LTESDSNPNS SPQPLVSDPT VENKGQRPTK RKDREKKAKA SAKKSKNESS EDAEELPYVH  180
VRARRGQATD SHSLAERARR EKINARMKLL QELVPGCSKI SGTASVLDEI INHVQSLQRQ  240
VELLSMRLAA ANPRVDFNMD NNFAENMSLV DSNFPSMVMP FMWPEVQVNE SRQPYHQQWQ  300
FNSLPQPVWG REQDNHNFIT PENSLLSYDS PANSDFEYCL DSWGVIQFSY EQINRKLEVL  360
VVVLSLHSRA TENGAMKVD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A02413.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010057666.10.0PREDICTED: transcription factor bHLH48 isoform X1
SwissprotQ8VZ027e-74BH048_ARATH; Transcription factor bHLH48
TrEMBLA0A059DIH90.0A0A059DIH9_EUCGR; Uncharacterized protein
STRINGXP_010057666.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM25762771
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.23e-73bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Li Y,Wang H,Li X,Liang G,Yu D
    Two DELLA-interacting proteins bHLH48 and bHLH60 regulate flowering under long-day conditions in Arabidopsis thaliana.
    J. Exp. Bot., 2017. 68(11): p. 2757-2767
    [PMID:28591805]