PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.B02000.2.p

Common Name

EUGRSUZ_B02000

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bHLH

Protein Properties

Length: 266aa MW: 30018.8 Da PI: 6.0413

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.B02000.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.3	7.7e-10	92	125	1	37
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS- CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskK 37 +r+ah + Er+RR+++N+ ++ Lr+l+P + + +K Eucgr.B02000.2.p 92 QRMAHIATERNRRKQMNEHLSVLRSLMPDS---HVQK 125 79**************************96...4444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	6.0E-9	90	125	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.46E-7	90	125	No hit	No description
SuperFamily	SSF47459	6.98E-9	90	126	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	9.413	91	142	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.0E-7	92	125	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence Send to blast
MALEAVVFPD DPFNYYNCKE VQSLLGECWS FDFGDQEQCE NSHFLSTLEI QTEDHECSGW 60 NHQSNVSSKA LIDRPKRCRY KRRKNKKEME SQRMAHIATE RNRRKQMNEH LSVLRSLMPD 120 SHVQKLGAHK EMEGQSSKCE DDISSPPFSE FFTCPQYSAS PGQGNDSVPM NEWTSLTQSA 180 IADIEVTMVE THANLKVRSK RRPKQLLRLV SGLQSVGLTV LHLNVTTAEP FVLYCLTLKV 240 EDGCQMTSGD EIAAAANQIL SSIQE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	103	RMAHIATERNRR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.B02000.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010043101.1	0.0	PREDICTED: transcription factor bHLH96 isoform X2
TrEMBL	A0A059D338	0.0	A0A059D338_EUCGR; Uncharacterized protein
STRING	XP_010043100.1	0.0	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-51	bHLH family protein

Link Out ? help Back to Top
Phytozome	Eucgr.B02000.2.p