PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B02079.1.p
Common NameEUGRSUZ_B02079
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GATA
Protein Properties Length: 67aa    MW: 7296.55 Da    PI: 8.5177
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B02079.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA313.4e-102847120
              GATA  1 CsnCgttkTplWRrgpdgnk 20
                      C+ C+ttkTplWR gp+g+k
  Eucgr.B02079.1.p 28 CADCKTTKTPLWRGGPSGPK 47
                      ******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004010.00222266IPR000679Zinc finger, GATA-type
PROSITE profilePS501149.3672245IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.95E-52546No hitNo description
Gene3DG3DSA:3.30.50.107.1E-82645IPR013088Zinc finger, NHR/GATA-type
PfamPF003209.7E-82848IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    Send to blast
MGIGNLILLQ SPLESVAEEK IETNNKFCAD CKTTKTPLWR GGPSGPKREF LVHGLPVVFL  60
NCRFPP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B02079.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018724160.17e-18PREDICTED: GATA transcription factor 15 isoform X2
TrEMBLA0A059D4T54e-41A0A059D4T5_EUCGR; Uncharacterized protein
STRINGXP_010043208.19e-17(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.12e-11GATA transcription factor 16