PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B02627.1.p
Common NameEUGRSUZ_B02627, LOC104432988
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 287aa    MW: 31746.7 Da    PI: 7.9604
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B02627.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.94.8e-331972255
           G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                      prlrWtpeLH++Fv+a+++LGG++kAtPk +l+lm+v gLt++hvkSHLQ+YR+
  Eucgr.B02627.1.p 19 PRLRWTPELHQCFVHAIQRLGGQDKATPKLVLQLMDVRGLTISHVKSHLQMYRS 72
                      8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.6241575IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.8E-321576IPR009057Homeodomain-like
SuperFamilySSF466894.66E-161774IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-241972IPR006447Myb domain, plants
PfamPF002493.3E-92071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MGSCGRSGTV RQYVRSKVPR LRWTPELHQC FVHAIQRLGG QDKATPKLVL QLMDVRGLTI  60
SHVKSHLQMY RSMRSDLGRS DRGCGQQKRR AAEDDDPDRD GGCVEEVNDD EGPPHAFAKP  120
VHHSRFACSS PCKRSRTEKV ATTTTSAVAE QAPYGFEVGG VDGFRWHTPC MPRDLHSFND  180
PLECAAKEES KFPLIAKLQD RMQMPRKGLK LTDWRSFPLE EYEVSQGCEL SLSLSLQCHS  240
IHRSNGSSTS EISEAFSSCS RSRECSGPCS DKSSVNLDLS IALCGS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A8e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B02627.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010043897.10.0PREDICTED: uncharacterized protein LOC104432988
TrEMBLA0A059D6990.0A0A059D699_EUCGR; Uncharacterized protein
STRINGXP_010043897.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM36328184
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.15e-34G2-like family protein