PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B03669.1.p
Common NameEUGRSUZ_B03669, LOC104433824
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 432aa    MW: 47263.3 Da    PI: 7.4135
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B03669.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.3e-12365410655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR +i +++ +L++l+P+     +k  + a++L +Av+YIk+Lq
  Eucgr.B03669.1.p 365 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKDLQ 410
                       689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.288359409IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-16362424IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.15E-12363414No hitNo description
Gene3DG3DSA:4.10.280.103.2E-15364420IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-9365410IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-13365415IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0042335Biological Processcuticle development
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MESDLQQQQQ QQHHHHAFLD HGHDPPLPQH HQQQQMSSGL SRYRSAPSSF ASLFERDFCN  60
ELLGRPPSPE TERFLARLIS GGQDESPAAA AAAAQNLGGF QRSPPQNEVT NPQPQLMEAV  120
KSEANVIPQQ QSNYSSGSYY QSSSQQPQPP RPNPSSTYGA AGSDRLPPSP KVGGSNPNLV  180
RHSSSPAGLF ANINIDNGFA SMESMRNFVA CGGANAEASF ANANRLTNHM SYSSRSAVGH  240
MSPISELGDK RMEASIDEGA AFGEGNANDY VAGYPMSSWE DSASMSENFN ALKRSRDDDK  300
KFSGLNASDL VNEEVRSRPP MGLTHHLSLP KTSAEISSIE KFLQLQDSVP CKIRAKRGCA  360
THPRSIAERV RRTKISERMR KLQDLVPNMD KQTNTADMLD LAVDYIKDLQ TQVKGLSANR  420
ARCTCLNRQQ Q*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00646PBMTransfer from LOC_Os08g39630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B03669.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010045000.10.0PREDICTED: transcription factor bHLH130 isoform X1
TrEMBLA0A059D9760.0A0A059D976_EUCGR; Uncharacterized protein
STRINGXP_010045000.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM105472632
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.15e-71bHLH family protein