PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B03921.1.p
Common NameEUGRSUZ_B03921
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GeBP
Protein Properties Length: 259aa    MW: 29032.9 Da    PI: 10.3456
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B03921.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57349.11.6e-1541125398
            DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                       + +l+seeDei lL+ l + ++     p++d     + ++ks+    ++ q+ +KirrL++K++++ ++     +  ++++hd+k+fel++ +
  Eucgr.B03921.1.p  41 PDKLFSEEDEIRLLKSLSKLTN-----PTADP-PTLDRIEKSLGPSLTRAQIANKIRRLRHKYHRQART-----KALIRTPHDRKVFELARDV 122
                       6789*************99955.....55554.45689**************************99998.....7899*************** PP

            DUF573  96 Wgs 98 
                       Wg+
  Eucgr.B03921.1.p 123 WGK 125
                       *95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.7E-1543124IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0005829Cellular Componentcytosol
GO:0009507Cellular Componentchloroplast
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MSTAVELRMS PRLRSRASSS PASAQSSDHR PPAGEQQNPR PDKLFSEEDE IRLLKSLSKL  60
TNPTADPPTL DRIEKSLGPS LTRAQIANKI RRLRHKYHRQ ARTKALIRTP HDRKVFELAR  120
DVWGKRPSSR KERKERKGKE EKKQQANLEE EREKDEGEIL GGEEESGGVV AAAAVAVADL  180
GSFPALVEEC ERCFPGNGVW REGLKRLEEG RLRKVNERVV WLRMEEATLM AKKAELTQDL  240
TRMILDSVAP SSSQAPTA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129143RKERKERKGKEEKKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B03921.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010045293.10.0PREDICTED: uncharacterized protein LOC104434041
TrEMBLA0A059DA760.0A0A059DA76_EUCGR; Uncharacterized protein
STRINGXP_010045293.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17149810
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.17e-10DNA-binding storekeeper protein-related transcriptional regulator