PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.C02659.2.p
Common NameEUGRSUZ_C02659
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 258aa    MW: 29314.6 Da    PI: 9.5053
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.C02659.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY955.3e-3094151258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                       +Dgy+WrKYGqK+ k+++ pr+YYrC++a gCpvkkkv+rsaed ++++ tYeg Hnh
  Eucgr.C02659.2.p  94 RDGYQWRKYGQKVTKDNPSPRAYYRCSMApGCPVKKKVQRSAEDRTLLVATYEGLHNH 151
                       7***************************99**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.2E-2983152IPR003657WRKY domain
PROSITE profilePS5081126.33788154IPR003657WRKY domain
SuperFamilySSF1182909.55E-2690152IPR003657WRKY domain
SMARTSM007745.0E-3493153IPR003657WRKY domain
PfamPF031061.6E-2495151IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MFSFMDVPGS HEKETEKILR DELKRLRKEN ETLKVMVEVI GSKCSILETH LRESHCPPYH  60
HDSNKRARLE EFPFTKSSKI CVKVDEEDKS LVLRDGYQWR KYGQKVTKDN PSPRAYYRCS  120
MAPGCPVKKK VQRSAEDRTL LVATYEGLHN HGTVDVPNRD RLPLRLDQSP RGQLVNRNLT  180
LMPMMSPSAI QPPIALDLGL SRSSFPQDPK PSYLSKNLSF GNRSNDCAKI EEYAASLVRD  240
PKFTEALALT VARTLNN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-22921511371WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.C02659.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010051128.10.0PREDICTED: WRKY transcription factor WRKY76
TrEMBLA0A059CSW40.0A0A059CSW4_EUCGR; Uncharacterized protein
STRINGXP_010051128.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.22e-38WRKY DNA-binding protein 18