PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.C03986.5.p
Common NameEUGRSUZ_C03986
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 249aa    MW: 27701.7 Da    PI: 6.8307
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.C03986.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.42.4e-16161216358
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                       +lkr +r+ +NRe+Ar+sR+RK+a ++eLe  ++ L +eN++L k+l    +++  
  Eucgr.C03986.5.p 161 DLKRIKRMVSNRESARKSRKRKQAHLAELEIQADRLRGENSTLFKQLLDAAQHYRH 216
                       69******************************************999888887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-17159223IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.8E-11160210No hitNo description
PROSITE profilePS5021710.369161207IPR004827Basic-leucine zipper domain
PfamPF001703.4E-13162209IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.81E-11163208No hitNo description
CDDcd147021.86E-19164215No hitNo description
PROSITE patternPS000360166181IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MEEGKAGGGA EKMKKSASEL GLEESMRIMM IAPSPEHHHL DHHPPHNYCY DSPHTTSISC  60
ITDAPPLSFH DWDISGPGSD HQHDMATAIT AFWDPPLLTE HSPPDSNSSI FVGSSTSLAN  120
KPEYRDIQAR EAMSGSSRQH SDEDDAATVA DPSEQSRYPT DLKRIKRMVS NRESARKSRK  180
RKQAHLAELE IQADRLRGEN STLFKQLLDA AQHYRHADTN NRVLKSDVEA LRAKCCGKCF  240
SYNHCLRG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175182RKSRKRKQ
2177182SRKRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.C03986.5.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010049789.11e-172PREDICTED: basic leucine zipper 9
SwissprotQ9FUD32e-38BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A059CW490.0A0A059CW49_EUCGR; Uncharacterized protein
STRINGXP_010049788.11e-172(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.11e-40basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]