PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D00881.1.p
Common NameEUGRSUZ_D00881
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 336aa    MW: 36973.9 Da    PI: 4.8589
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D00881.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.21.8e-052412751655
                       HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       + ++   L++l+ +      +K + a++L +AveYIk Lq
  Eucgr.D00881.1.p 241 LGDRVTALQQLVSPF-----GKTDTASVLHEAVEYIKFLQ 275
                       555666677777776.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.636225274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.63E-11235288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.67E-6235279No hitNo description
Gene3DG3DSA:4.10.280.103.0E-8239279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MAEIIKVGRS SEEVNDDDAG RSIAFQDDFV QRSHQIDCMT DSTSLHMMGF DLFSASSDWN  60
LAVPQSSVID ESSTTDSKLQ EEDMASSKFK YEKNQAKDVM IDDSSHQIQT DYWGSHCAPT  120
CHGMSTNGSF TSYAYPSNSI RSSLEPEHHQ LQPSPFNNQQ FSGLHSNNSS LNESSFINAS  180
YAQFVHPALE EKQPSCPKTS CEDAGNLGSM AKNIGVEPAS KRPRFETPSP LPTFKVRKEK  240
LGDRVTALQQ LVSPFGKTDT ASVLHEAVEY IKFLQDQVSV LCSPYMGNEA PVEQGLSKQD  300
LRSRGLCLMP ISSTYPVATS ATPHFWTPTL EGNFT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D00881.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010052471.10.0PREDICTED: transcription factor bHLH112 isoform X2
TrEMBLA0A059CDH60.0A0A059CDH6_EUCGR; Uncharacterized protein
STRINGXP_010052470.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM80622636
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.16e-46bHLH family protein