PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D00972.4.p
Common NameEUGRSUZ_D00972
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 268aa    MW: 28795.5 Da    PI: 7.0709
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D00972.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like56.46.6e-1825621955
           G2-like 19 eqLGGs.ekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                      ++LGG+  +AtPk +l++m+v+gLt++hvkSHLQkYRl
  Eucgr.D00972.4.p 25 HNLGGQiVRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 62
                      579997369****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.9E-162563IPR009057Homeodomain-like
TIGRFAMsTIGR015578.7E-123163IPR006447Myb domain, plants
SuperFamilySSF466891.97E-63262IPR009057Homeodomain-like
PfamPF143791.3E-2394140IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MPISHPSSGY GGHMTFTIAL LMLWHNLGGQ IVRATPKGVL RVMGVQGLTI YHVKSHLQKY  60
RLAKYLPDSS DGKKAEKKES ADVLSDMDGS SGGMQITEAL KLQMEVQKRL HEQLEVQRQL  120
QLRIEAQGKY LKKIIEEQQR LSGALADGSA DESGDKGQED SKTDPPTPAP ISESPIQDKS  180
KDCAVAKSLS LDGSLSSHNH EPLTPDSGCN VSSPAESPDG ERSAKKPRVT AGASHAKPEI  240
VLHPIFESSL GCSYTNSSFK LPDQGSV*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D00972.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018727520.11e-159PREDICTED: LOW QUALITY PROTEIN: myb family transcription factor PHL7-like
SwissprotQ9SJW01e-102PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A059CDZ00.0A0A059CDZ0_EUCGR; Uncharacterized protein
STRINGXP_006449962.11e-108(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.17e-89G2-like family protein