PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D00972.5.p
Common NameEUGRSUZ_D00972
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 226aa    MW: 24268.1 Da    PI: 6.1656
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D00972.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.31.1e-101203655
           G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                      m+v+gLt++hvkSHLQkYRl
  Eucgr.D00972.5.p  1 MGVQGLTIYHVKSHLQKYRL 20
                      99*****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.6E-10121IPR009057Homeodomain-like
PfamPF143799.8E-245298IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MGVQGLTIYH VKSHLQKYRL AKYLPDSSDG KKAEKKESAD VLSDMDGSSG GMQITEALKL  60
QMEVQKRLHE QLEVQRQLQL RIEAQGKYLK KIIEEQQRLS GALADGSADE SGDKGQEDSK  120
TDPPTPAPIS ESPIQDKSKD CAVAKSLSLD GSLSSHNHEP LTPDSGCNVS SPAESPDGER  180
SAKKPRVTAG ASHAKPEIVL HPIFESSLGC SYTNSSFKLP DQGSV*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D00972.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018727520.11e-153PREDICTED: LOW QUALITY PROTEIN: myb family transcription factor PHL7-like
SwissprotQ9SJW01e-95PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A059CDQ51e-161A0A059CDQ5_EUCGR; Uncharacterized protein
TrEMBLA0A059CF791e-160A0A059CF79_EUCGR; Uncharacterized protein
STRINGXP_006467243.11e-100(Citrus sinensis)
STRINGXP_006449962.11e-100(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.29e-83G2-like family protein