PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D01219.2.p
Common NameEUGRSUZ_D01219
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 172aa    MW: 18570.5 Da    PI: 8.727
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D01219.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.73e-10148168121
                       ---SS-EEEEEEE--TT-SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                       ldDgy+WrKYGqK+vk+s +p
  Eucgr.D01219.2.p 148 LDDGYKWRKYGQKVVKNSLHP 168
                       59****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-12133168IPR003657WRKY domain
SuperFamilySSF1182903.27E-9140169IPR003657WRKY domain
PROSITE profilePS5081112.484143171IPR003657WRKY domain
PfamPF031061.8E-6149169IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MEGERGSSSS SVPNYDLQVT FSGASHGIHE IGFVPFEDQN QVLGFLTPAP PLIAAGEGAT  60
AAATTTTSRV GLGHHNGLVA RSSWNNDQVG AHDPKAVSDE NCSANPSEGN NSWWRSSTAA  120
AEKGKMKVRR KLREPRFCFQ TRSEVDVLDD GYKWRKYGQK VVKNSLHPSN K*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126132KVRRKLR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00618PBMTransfer from AT2G44745Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D01219.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010052790.11e-123PREDICTED: probable WRKY transcription factor 12
TrEMBLA0A059CG211e-125A0A059CG21_EUCGR; Uncharacterized protein
STRINGXP_010052790.11e-123(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.12e-30WRKY family protein