PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D01605.1.p
Common NameEUGRSUZ_D01605, LOC104443071
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 163aa    MW: 17962.5 Da    PI: 9.6101
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D01605.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.95.3e-1029563158
                      T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY 31 gCpvkkkversaedpkvveitYegeHnh 58
                      gCpvkkkv+rsaed ++++ tYeg Hnh
  Eucgr.D01605.1.p 29 GCPVKKKVQRSAEDRTLLVATYEGLHNH 56
                      8*************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081110.969159IPR003657WRKY domain
SMARTSM007746.3E-42358IPR003657WRKY domain
PfamPF031061.3E-62756IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-82858IPR003657WRKY domain
SuperFamilySSF1182903.01E-72857IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MDINGENMDR RSRRIIRPLE LISVLHGSGC PVKKKVQRSA EDRTLLVATY EGLHNHGTVD  60
VPNSDHLPLR SDHSPRGQPV KRDLTLMPTM PPSSIQPPIT LDLSLSRSSL PQDPKPSYLS  120
KNLSFGNRSS DCAKIEEYAA SLVRDPKFTE ALALTVARTL NN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D01605.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010054736.22e-91PREDICTED: LOW QUALITY PROTEIN: WRKY transcription factor WRKY76
TrEMBLA0A059CFU21e-114A0A059CFU2_EUCGR; Uncharacterized protein
STRINGXP_010054736.11e-115(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM156101014
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.22e-12WRKY DNA-binding protein 18