PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D02324.1.p
Common NameEUGRSUZ_D02324
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 397aa    MW: 42323.7 Da    PI: 6.3237
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D02324.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.6e-30211268258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                       +D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ver+++dp ++++tY++eHnh
  Eucgr.D02324.1.p 211 SDEWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVERNRSDPGIFIVTYTSEHNH 268
                       79*************************998**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-31197271IPR003657WRKY domain
PROSITE profilePS5081133.224205271IPR003657WRKY domain
SuperFamilySSF1182904.97E-26207270IPR003657WRKY domain
SMARTSM007748.2E-37210270IPR003657WRKY domain
PfamPF031061.4E-25212268IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MDVSSIYAVS AFFCLFSLSL SLCASRFFFR QAKQSAVAAF AEDFSELRLY NSRAREAMEV  60
DWDLHAVVRG CTASSSSSAA AAAAASSVAE RRLEPAASRA PFSAGEGPDS EPFETRKGAF  120
LEELHELYKP FLPAYGPLFS HRSSLSVSSP LAVEGAKSSS SAGLMQKRPF QSASAIAPLA  180
PFKTSSSAPR SKKRKSQMKV VRQVPAEKVS SDEWAWRKYG QKPIKGSPYP RSYYRCSSSK  240
GCLARKQVER NRSDPGIFIV TYTSEHNHVA PTHRSSLAGS TRPKTSTPET EVSVDSAATA  300
TTTPGTSGEE EAAHVPQSTS SESGEEKEYS QSSSMLDNDG EDETGGSSGA ALSDDFFVGL  360
EGLLGSHYED PFSDPSQPWF GLSWSAGDAV TATGGS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-18196272380Disease resistance protein RRS1
5w3x_D3e-18196272380Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D02324.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010053762.10.0PREDICTED: WRKY transcription factor 22
TrEMBLA0A059CIQ60.0A0A059CIQ6_EUCGR; Uncharacterized protein
STRINGXP_010053762.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM78102741
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.17e-46WRKY family protein