PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D02359.1.p
Common NameEUGRSUZ_D02359, LOC104442163
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 338aa    MW: 37597 Da    PI: 5.2697
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D02359.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.91e-28112171258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                       +Dgy+WrKYGqKe+ g++fpr+YYrCt++   gC ++k+v+rs++dp+vve++Y+g+H++
  Eucgr.D02359.1.p 112 EDGYSWRKYGQKEILGARFPRAYYRCTHRnaqGCLATKQVQRSDQDPTVVEVKYRGRHTC 171
                       8***************************98899*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.102106169IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.5E-27108172IPR003657WRKY domain
SuperFamilySSF1182903.01E-24110171IPR003657WRKY domain
SMARTSM007742.5E-39111173IPR003657WRKY domain
PfamPF031061.1E-25112171IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MEKVISWEQH NLISELVQGK DLAKQLRNHL VSPSSSRETH EYFVEKILSC YQKSLAMLNC  60
DALAEEHRPA FSIGTSGSPK DEGDACKKRK TMPRWTEQVQ LNSEAGLEGH HEDGYSWRKY  120
GQKEILGARF PRAYYRCTHR NAQGCLATKQ VQRSDQDPTV VEVKYRGRHT CIQARSSAIS  180
PDPIIKEEPP KATAIRQEQP KPSLDTLLSF KWGLNVKAEN ARQDDVFPLF TFSSPAVETE  240
NGERDYFADA LMDDGFMDTF SSPATSGSNY FSLSLDHMAN FCPPISVQTP ESGLTEIVSA  300
PTSVTNSPMG DAAFSAFSLG KDDFNLDCSF DGSEFLL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-18112171968OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D02359.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010053800.10.0PREDICTED: probable WRKY transcription factor 53
TrEMBLA0A059CIZ60.0A0A059CIZ6_EUCGR; Uncharacterized protein
STRINGXP_010053800.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19332783
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-51WRKY family protein