PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.D02359.2.p
Common NameEUGRSUZ_D02359, LOC104442163
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 247aa    MW: 27339.3 Da    PI: 4.6709
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.D02359.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.66e-292180258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
                      +Dgy+WrKYGqKe+ g++fpr+YYrCt++   gC ++k+v+rs++dp+vve++Y+g+H++
  Eucgr.D02359.2.p 21 EDGYSWRKYGQKEILGARFPRAYYRCTHRnaqGCLATKQVQRSDQDPTVVEVKYRGRHTC 80
                      8***************************98899*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.1021578IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.0E-271781IPR003657WRKY domain
SuperFamilySSF1182901.7E-241980IPR003657WRKY domain
SMARTSM007742.5E-392082IPR003657WRKY domain
PfamPF031066.3E-262180IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MPRWTEQVQL NSEAGLEGHH EDGYSWRKYG QKEILGARFP RAYYRCTHRN AQGCLATKQV  60
QRSDQDPTVV EVKYRGRHTC IQARSSAISP DPIIKEEPPK ATAIRQEQPK PSLDTLLSFK  120
WGLNVKAENA RQDDVFPLFT FSSPAVETEN GERDYFADAL MDDGFMDTFS SPATSGSNYF  180
SLSLDHMANF CPPISVQTPE SGLTEIVSAP TSVTNSPMGD AAFSAFSLGK DDFNLDCSFD  240
GSEFLL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-192180968OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.D02359.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010053800.10.0PREDICTED: probable WRKY transcription factor 53
TrEMBLA0A059CID20.0A0A059CID2_EUCGR; Uncharacterized protein
TrEMBLA0A059CIZ60.0A0A059CIZ6_EUCGR; Uncharacterized protein
STRINGXP_010053800.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.25e-41WRKY family protein