PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E00078.1.p
Common NameEUGRSUZ_E00078, LOC104443387
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 407aa    MW: 43481.8 Da    PI: 6.533
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E00078.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1728.7e-23261323163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeNkaLk+e+++l+++++kl+ e+
  Eucgr.E00078.1.p 261 ERELKRERRKQSNRESARRSRLRKQAETEELAKKVDSLSAENKALKSEISQLTENSDKLRLEN 323
                       89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.9E-34196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.4E-12115235No hitNo description
Gene3DG3DSA:1.20.5.1704.3E-17255320No hitNo description
SMARTSM003389.1E-22261325IPR004827Basic-leucine zipper domain
PfamPF001704.4E-21261323IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.449263326IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-11264319No hitNo description
CDDcd147024.16E-19266317No hitNo description
PROSITE patternPS000360268283IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MGNNEETKSS KSDKSSSPVP PQDQTGVHVY HPDWAAMHAY YGPRVALPPY YNSAVSSGHG  60
PHPYMWGPPQ PMMPPYGPPY AAIYSHGGVY GHPAIPLTPT PLAAETPKKS SANSDNGLVK  120
KLKSFEGLAM SIGSGGDADS ADDGTDKRSS QSADSGDSSD EDQSGADKAR RKRSREGTSS  180
NGDGKSEVQG KVAGEVDAAS ENVSGGAIER PRATGKLAAP VNSPSMSSSL DLKNSCMDAN  240
ANPVSILQPG VVPPEAWLQN ERELKRERRK QSNRESARRS RLRKQAETEE LAKKVDSLSA  300
ENKALKSEIS QLTENSDKLR LENATLMERL ENAQGVEKAV ESLGKFNDNG LLSDKTENLL  360
SRVNNSGAVD RRSEDEGEIY ERKSNSGAKL HQLLDSKPRT DAVAAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1277283RRSRLRK
2277284RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E00078.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055062.10.0PREDICTED: common plant regulatory factor 1 isoform X3
RefseqXP_018730273.10.0PREDICTED: common plant regulatory factor 1 isoform X1
SwissprotQ990891e-132CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A059C0130.0A0A059C013_EUCGR; Uncharacterized protein
STRINGXP_010055062.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35712661
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-84G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]