PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E00223.1.p
Common NameEUGRSUZ_E00223
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 417aa    MW: 44615 Da    PI: 6.808
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E00223.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_167.72e-21314376163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+e+kr+rrkq+NRe+ArrsR+RK+ae++eL+ ++++L+ eN +L+ e+++++ e+++l +e+
  Eucgr.E00223.1.p 314 EREIKRQRRKQSNRESARRSRLRKQAECDELAHRADALKDENASLRAEVSRIRSEYEQLLAEN 376
                       89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.3E-3019114IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.3E-50149281No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-17307372No hitNo description
SMARTSM003381.7E-22314378IPR004827Basic-leucine zipper domain
PfamPF001701.0E-19314376IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.013316379IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-11317373No hitNo description
CDDcd147021.35E-21319369No hitNo description
PROSITE patternPS000360321336IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MLLEQDALRN LWSERGRNMG SSETEKSAKE KETKGPPPTT LEQSSTASAN PVTPDWSGFQ  60
AYSPIPPHGF LASSPHAQPY MWGVQHIMPP YGTPPHPYVA MYPHGGIYAH PSMPPGSYPF  120
SPFAMPSPNG IAEGSTTGEA DGKPTEVKEK LPIKRSKGSL GSLSMITGKN NELAKTSGAS  180
ANGAYSKSAE SGSEGSSEGS DDNSQNDSQQ KSGGRQDSLE DVSQNGNAEH GSQNGGSNTP  240
HGTVNQSVAL VPIAAAGPAG VPGPTTNLNI GMDYWGTPAM PAIRGKVPST PVAGGMVTPG  300
SRESVQSQMW LQDEREIKRQ RRKQSNRESA RRSRLRKQAE CDELAHRADA LKDENASLRA  360
EVSRIRSEYE QLLAENASLK ERLGEVPAHE DSRSEERHLN SESQKTAKTE HGQNAR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1330336RRSRLRK
2330337RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E00223.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055248.10.0PREDICTED: bZIP transcription factor 16
RefseqXP_010055249.10.0PREDICTED: bZIP transcription factor 16
SwissprotQ501B21e-162BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A059C1A60.0A0A059C1A6_EUCGR; Uncharacterized protein
STRINGXP_010055248.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM37012557
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-134basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]