PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E00273.1.p
Common NameEUGRSUZ_E00273, LOC104443542
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 347aa    MW: 37914.6 Da    PI: 7.04
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E00273.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.94.3e-14130181155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A+e++k+L+
  Eucgr.E00273.1.p 130 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 181
                       79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.107.5E-14128184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.24E-12128185No hitNo description
SuperFamilySSF474592.36E-16128194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.199129180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-11130181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-10135186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MALDALSASD LLNFIIYDTI SVTPYSSHDS SDTTFLDSHL YHLIQPPHQE QAAAAASAAS  60
AAAGSCSLQT NSISGSPPPQ PSPPAPPPQG RRARSGEKRA AGQGAAAAQG RKKRKRRPRV  120
CKNKEEAETQ RMTHIAVERN RRKQMNEHLA VLRSLMPESY VQRGDQASIV GGAIEFVKEL  180
EHLLQSLEAQ KLQHSQYKAG EDIASEEADT TNDTNNDDPS KILQPPFSQF FMYPQYTWSQ  240
APSKYTASST STTGAAIADI EVTLIETHAS LRILSRRNTR QLSRLIAGFH TLHLSILHLN  300
VTTLDPLVLY SISAKVEEGC QLTSVDDIAR AVHHMLRIIE EGSEIC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110115RKKRKR
2110116RKKRKRR
3111116KKRKRR
4130141RMTHIAVERNRR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E00273.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055312.10.0PREDICTED: transcription factor bHLH71
SwissprotQ56XR02e-69BH071_ARATH; Transcription factor bHLH71
TrEMBLA0A059BZY00.0A0A059BZY0_EUCGR; Uncharacterized protein
STRINGXP_010055312.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM103892535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.19e-70bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]