PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E00512.1.p
Common NameEUGRSUZ_E00512
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 302aa    MW: 33848 Da    PI: 6.7263
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E00512.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.25.9e-13106155455
                       HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       +h e Er+RR+++   f+ Lr llP       ++K s ++i+ +Av+YIk++q
  Eucgr.E00512.1.p 106 THRETERQRRQEMAAHFQSLRLLLPLeY---LKGKRSMSDIVYEAVKYIKDMQ 155
                       8*************************77...9*******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.14E-1499172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.12E-5100159No hitNo description
PROSITE profilePS5088813.579102154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-12104171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-10106155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-6108160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MDPNASTIPS DETEDQVLQS ASSTPSHKDD ELLVIAAQQM NHTSSTAPSN ETEDQVSQSA  60
SPLSMIASSQ YGLDLTDRPD YRQWRNSGLS RRDLEKTSPK GEKKFTHRET ERQRRQEMAA  120
HFQSLRLLLP LEYLKGKRSM SDIVYEAVKY IKDMQSKIQK LSDKRDEIKK SESPNSHGTD  180
TNNRLACPSS SCSSRPKNIV IVKSYKRGVE VAISTEPEQG MPLRRVLEVL TGDGLDLINC  240
TSTKVNGRLI HRIESEITGG QTVDLSELQQ KLTNLEFEEG LPHVKFPILR ELSLQQSSLH  300
I*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E00512.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055576.10.0PREDICTED: transcription factor bHLH120
TrEMBLA0A059C1240.0A0A059C124_EUCGR; Uncharacterized protein
STRINGXP_010055576.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3488122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-30bHLH family protein