PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E00529.1.p
Common NameEUGRSUZ_E00529, LOC104445996
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 290aa    MW: 31584.5 Da    PI: 6.5951
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E00529.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-1968118155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++  rg+Wv+e+r+p   +k++r++lg++ tae+Aa+a++ a+++l+g
  Eucgr.E00529.1.p  68 PVYRGVRRRN-RGKWVCELREP---NKKTRVWLGTYPTAEMAARAHDVAALALRG 118
                       68*****887.8*********8...347*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.1E-1568118IPR001471AP2/ERF domain
SMARTSM003806.9E-2769133IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-2969129IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-1969128IPR016177DNA-binding domain
PROSITE profilePS5103222.76169127IPR001471AP2/ERF domain
CDDcd000187.45E-2770129No hitNo description
PRINTSPR003677.6E-97081IPR001471AP2/ERF domain
PRINTSPR003677.6E-992108IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MNIHTQLPSD VRVPTPAQSS SPSPSQSSQS ESSASHAACS DEEPAVALAS SRPKRPAGRK  60
VFKETRHPVY RGVRRRNRGK WVCELREPNK KTRVWLGTYP TAEMAARAHD VAALALRGRH  120
GVCLNFADSA WRLPVPASRE AAEIRRTAMA AAEAFRPAEA EEAVSSCGEA SGGSVCPGQE  180
ASVHIVHDKK VKQERESDCM EIEESTSFDM KAWLERPLLS PTPHDASVRL KQERASGCVK  240
IEEMTSLDMK AWLECPLLSP TPHDAGVPLS CDFDADGDDP DVSLWSYSL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E00529.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010058216.10.0PREDICTED: dehydration-responsive element-binding protein 1F
TrEMBLA0A059C1I00.0A0A059C1I0_EUCGR; Uncharacterized protein
STRINGXP_010058216.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35528187
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.14e-41C-repeat/DRE binding factor 2