PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E00850.2.p
Common NameEUGRSUZ_E00850
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 274aa    MW: 30905.9 Da    PI: 6.5048
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E00850.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.82.6e-2944103258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                       dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs+edp+v+eitY+g+H++
  Eucgr.E00850.2.p  44 DDGYSWRKYGQKDILGATYPRSYYRCTYRntqNCWATKQVQRSDEDPTVFEITYRGTHTC 103
                       8***************************98899*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.05638101IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.6E-2938104IPR003657WRKY domain
SuperFamilySSF1182903.79E-2642104IPR003657WRKY domain
SMARTSM007746.4E-4043105IPR003657WRKY domain
PfamPF031065.4E-2744103IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0010150Biological Processleaf senescence
GO:0010193Biological Processresponse to ozone
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009507Cellular Componentchloroplast
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MNSKRGLAII SRTEIYPKKG EKLMPKWTDQ VRISSENGLE GPHDDGYSWR KYGQKDILGA  60
TYPRSYYRCT YRNTQNCWAT KQVQRSDEDP TVFEITYRGT HTCGNSGPSV PSPASSEKQE  120
QKQINHQSNH HQHLQQQQSQ EMLSKFRAGL RVDTNNLDNN EKAYHPFSFP SASVGLLQIE  180
HCSSSTLTNV NSSLFGSFSS TFFSPSTPES CYFSMHQAND LGQAHNMQHL ESDHNEIIST  240
NTSSTNSPIM DLEFSLDQVG IDPNFPFDTS FFP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-17451011874Disease resistance protein RRS1
5w3x_D1e-17451011874Disease resistance protein RRS1
6ir8_A6e-1844103968OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E00850.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055851.10.0PREDICTED: probable WRKY transcription factor 53
TrEMBLA0A059C1S80.0A0A059C1S8_EUCGR; Uncharacterized protein
STRINGXP_010055851.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.12e-51WRKY family protein