PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E02074.1.p
Common NameEUGRSUZ_E02074
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 238aa    MW: 26531 Da    PI: 6.5137
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E02074.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.92.4e-10126221284
                       EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvv 81 
                       +k+lt+sd ++++rl +p+  ++++             k+ e+ ++++ d +   + ++ + y+ +sg+yvl+++W keFv+  gL egD + 
  Eucgr.E02074.1.p 126 KKTLTKSDLGQLSRLLIPRAGVATYvlpcmdeerarRAKSSEGAEVVVWDADTrSEHQLVFAYWASSGSYVLKGCWmKEFVQRRGLAEGDEIG 218
                       699**************************9988888555558889999997764556677777*************668***********776 PP

                       EEE CS
                B3  82 Fkl 84 
                       +  
  Eucgr.E02074.1.p 219 ICW 221
                       654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575134No hitNo description
SuperFamilySSF1019362.55E-13123232IPR015300DNA-binding pseudobarrel domain
CDDcd100171.21E-15125234No hitNo description
Gene3DG3DSA:2.40.330.103.6E-14126235IPR015300DNA-binding pseudobarrel domain
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MKLVDPFTLE LPPTGDVPRD ELHTLLPSIG SSSCVSYLHD HERNHEEQGR ETSSAAVVVP  60
ARVFFPLTPD PTRGYLDTKE LSAAPTRPER KSQKGKRGAS ECEGEEERCG DVSTELVLRY  120
DPYKIKKTLT KSDLGQLSRL LIPRAGVATY VLPCMDEERA RRAKSSEGAE VVVWDADTRS  180
EHQLVFAYWA SSGSYVLKGC WMKEFVQRRG LAEGDEIGIC WDSIASKFHF SLLRKAN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E02074.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010058729.11e-161PREDICTED: B3 domain-containing protein At2g33720
TrEMBLA0A059C5V81e-174A0A059C5V8_EUCGR; Uncharacterized protein
STRINGXP_010058729.11e-160(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM456952
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.11e-25B3 family protein