PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E02075.1.p
Common NameEUGRSUZ_E02075
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 238aa    MW: 26639.1 Da    PI: 6.511
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E02075.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.94.9e-10126217280
                       EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfv 80 
                       +k+l++sd ++++rl +p+  ++++             k++e+ ++++ de+   + ++ + y+ +sg+yvl+++W keFv+  gL egD +
  Eucgr.E02075.1.p 126 KKTLKKSDLGQLSRLLIPRAGVATYvlpcmdeerarRVKSNEGAEVVVWDEDThSEHQLVFAYWASSGSYVLKGCWmKEFVQRRGLAEGDEI 217
                       6999************************99988888444457889999998876666666677*************668***********65 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575134No hitNo description
SuperFamilySSF1019363.53E-13121224IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.106.5E-14124222IPR015300DNA-binding pseudobarrel domain
CDDcd100175.00E-16124233No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MKLVDPFTLE LPPTGDVPRS ELHTLLPSIG SSSCVSHLHD HERNHKEEGR ETSSAAVVVP  60
ARVFFPLTPD PTRGYLDTKE LSAAPTRPER KSQKGKRGAS ECEAEEERCG DVSTEQVLRY  120
DPYHIKKTLK KSDLGQLSRL LIPRAGVATY VLPCMDEERA RRVKSNEGAE VVVWDEDTHS  180
EHQLVFAYWA SSGSYVLKGC WMKEFVQRRG LAEGDEIGIH WDPIASKFDF SLLHKAN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E02075.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041685.11e-165PREDICTED: putative B3 domain-containing protein At1g78640
TrEMBLA0A059C5C51e-175A0A059C5C5_EUCGR; Uncharacterized protein
STRINGXP_010041685.11e-165(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM456952
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.15e-24B3 family protein