PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.E02754.1.p

Common Name

EUGRSUZ_E02754

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

G2-like

Protein Properties

Length: 191aa MW: 21601.7 Da PI: 5.8106

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.E02754.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.4	8e-29	93	144	2	53
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 prlrWtp+LH +Fv+ave+LGG+e+AtPk++l+ m+vkgL+++hvkSHLQ + Eucgr.E02754.1.p 93 PRLRWTPQLHYSFVRAVERLGGQERATPKSVLQQMNVKGLSINHVKSHLQIH 144 8*************************************************76 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.3E-26	89	146	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.11E-13	91	145	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.1E-20	93	143	IPR006447	Myb domain, plants
Pfam	PF00249	2.4E-8	94	142	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence Send to blast
MRSLESIEDH QEKSEEKGEK SSPAVSSQKL SSFDLNEEAT FDEHDSPAED DDLISDEDDN 60 SSIREAEDKP GNRNAESAET MKAVRQYVRS KMPRLRWTPQ LHYSFVRAVE RLGGQERATP 120 KSVLQQMNVK GLSINHVKSH LQIHQMTGPD HHFRIENGRI VLARNHCGDS NYSDSDFSRY 180 LYSKAIITAA *

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-16	94	142	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-16	94	142	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-16	94	142	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-16	94	142	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-16	94	142	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-16	94	142	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-16	94	142	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-16	94	142	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-16	94	142	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-16	94	142	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-16	94	142	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-16	94	142	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.E02754.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010057109.1	1e-113	PREDICTED: uncharacterized protein LOC104445014
Refseq	XP_018728583.1	1e-113	PREDICTED: uncharacterized protein LOC104445014
Refseq	XP_018728584.1	1e-113	PREDICTED: uncharacterized protein LOC104445014
Refseq	XP_018728585.1	1e-113	PREDICTED: uncharacterized protein LOC104445014
TrEMBL	A0A059C6L8	1e-139	A0A059C6L8_EUCGR; Uncharacterized protein
STRING	XP_010057109.1	1e-113	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM363	28	184

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	6e-30	G2-like family protein

Link Out ? help Back to Top
Phytozome	Eucgr.E02754.1.p