PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E03271.1.p
Common NameEUGRSUZ_E03271, LOC104445267
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 181aa    MW: 20256 Da    PI: 9.4224
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E03271.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.5e-13961255
                      HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                      r+  +  Er+RR++++  f++L +l+P+ +  ++   ls  + L +A +YIk+Lq
  Eucgr.E03271.1.p  9 RADRKTTERNRRNQMKALFSKLHSLVPPqS--PRESTLSQPDQLSQAANYIKNLQ 61
                      6667889*********************44..56666*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.98E-7565No hitNo description
PROSITE profilePS5088812.258760IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-13775IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-12975IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-91061IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00371366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MERKPGSSRA DRKTTERNRR NQMKALFSKL HSLVPPQSPR ESTLSQPDQL SQAANYIKNL  60
QVKVEKMREQ KERLLEIEKI STSMKNGEMI GFKSPEIRIQ KMGSILEVVL VSGLDGQFMF  120
NETVRVIYEE GADIVNASFS NVGDAMLHTI HAKVEDGDSS DERVSQKLQK IVNDAYGASS  180
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E03271.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010057406.11e-130PREDICTED: uncharacterized protein LOC104445267
RefseqXP_018728441.11e-130PREDICTED: uncharacterized protein LOC104445267
TrEMBLA0A059C8761e-129A0A059C876_EUCGR; Uncharacterized protein
STRINGXP_010057406.11e-130(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM12782592
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-45bHLH family protein