PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E03273.1.p
Common NameEUGRSUZ_E03273
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 160aa    MW: 17877.5 Da    PI: 5.6301
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E03273.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.93.1e-072391755
                      HHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
               HLH 17 NsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                      +  f+eL +l+P+ +   p +K ls  + L +A +YI+sLq
  Eucgr.E03273.1.p  2 KALFSELHSLVPPrS---PTEKtLSLPDQLGEAANYIRSLQ 39
                      6689*********55...88888*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.105.4E-6152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-7154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.299138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MKALFSELHS LVPPRSPTEK TLSLPDQLGE AANYIRSLQV KVEKMREQKE QLLELGKINT  60
TMNSGPMIGF KSPEIRIWNN KSILEVVLVT GLDGQFMFNE TVRVIHEEGA DIVNASSSYV  120
GDAMLHTIHA KVGEGDSSDE RISERLRKIV NDMLMEFHP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E03273.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010057409.11e-114PREDICTED: uncharacterized protein LOC104445270
RefseqXP_010057410.11e-114PREDICTED: uncharacterized protein LOC104445270
SwissprotF4JIJ73e-34BH162_ARATH; Transcription factor bHLH162
TrEMBLA0A059C8K41e-113A0A059C8K4_EUCGR; Uncharacterized protein
STRINGXP_010057409.11e-114(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM12782592
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-36bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]