PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.E03593.1.p

Common Name

EUGRSUZ_E03593, LOC104447391

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

GeBP

Protein Properties

Length: 262aa MW: 30070.7 Da PI: 4.7884

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.E03593.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	59.9	6.7e-19	58	149	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 +++ ws+ De+ lL+ l++f a+++ +p+ d+ ++y+f+++ ++ ++k+q+ +K+ LK K+++ v+ gk+++ ++++ ++ ls+k+ Eucgr.E03593.1.p 58 MRKYWSKADELRLLRRLLEFSARKKENPVYDWGDIYKFISRDLETFYTKHQVRNKVYTLKSKYRDWVRL---GKKKQGMSPDELAAYRLSRKL 147 5788************************************************************999...88888999*********** PP DUF573 96 Wg 97 W+ Eucgr.E03593.1.p 148 WR 149 *7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	2.6E-18	60	148	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence Send to blast
MPASPALEDE ASEVTQAHEE DRDADPEEEP EEEEEDYDEE ETAKSRDGTR AKKGPDLMRK 60 YWSKADELRL LRRLLEFSAR KKENPVYDWG DIYKFISRDL ETFYTKHQVR NKVYTLKSKY 120 RDWVRLGKKK QGMSPDELAA YRLSRKLWRD EVKGESSGRS NGDGKAERGD RTALAALKAE 180 LLVFDRMPEG MGSGFLSEVK RFGAVGVDEE FLRAGLGLIE REKRAELEER WRKLQMAELA 240 ALAERAELIG LVAEAILEAY E*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.E03593.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010059432.1	0.0	PREDICTED: probable transcription factor At1g61730
TrEMBL	A0A059CAA2	0.0	A0A059CAA2_EUCGR; Uncharacterized protein
STRING	XP_010059432.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM313	28	181

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25650.1	5e-07	DNA-binding storekeeper protein-related transcriptional regulator

Link Out ? help Back to Top
Phytozome	Eucgr.E03593.1.p
Entrez Gene	104447391