PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F01535.1.p
Common NameEUGRSUZ_F01535
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 186aa    MW: 21255.1 Da    PI: 4.3888
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F01535.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.66.6e-1231049128
               NAM   9 PtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
                       P+ eel +++ +   ++   ++ +v+++v+ +++ P++L       e+ wyf  + ++k          ++ g+Wk  g+ +e++  + + +g
  Eucgr.F01535.1.p   3 PSTEELFTFFFCMPHADFA-PA-NVMTDVNPFDCLPQTLL------ENVWYFMDSMENK---------GAEGGFWKPRGEPREIFG-DASIKG 77 
                       8888888888876655554.33.6899***********95......5678887766554.........4679**************.9999** PP

               NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                          t  fy+ + p+ ektdW+m ey +
  Eucgr.F01535.1.p  78 WEATHEFYEVQGPHVEKTDWLMLEYYI 104
                       *************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.2611127IPR003441NAC domain
SuperFamilySSF1019411.12E-192127IPR003441NAC domain
PfamPF023652.7E-63103IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MCPSTEELFT FFFCMPHADF APANVMTDVN PFDCLPQTLL ENVWYFMDSM ENKGAEGGFW  60
KPRGEPREIF GDASIKGWEA THEFYEVQGP HVEKTDWLML EYYITTKVSR EALPAKDTKS  120
LCKVFCSSSL PPSDSEMPQN VAGTEFLTEN FINSLPPDNF NIPTKQQMQV RLTDFFVVAR  180
FFLRS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F01535.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060913.12e-85PREDICTED: uncharacterized protein LOC104448728
TrEMBLA0A059BPZ31e-136A0A059BPZ3_EUCGR; Uncharacterized protein
STRINGXP_010064553.11e-126(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137081023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-13NAC domain containing protein 58