PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F01536.1.p
Common NameEUGRSUZ_F01536
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 421aa    MW: 47071.7 Da    PI: 4.4715
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F01536.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.22.2e-122011713128
               NAM  13 elvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105
                       el  +++   ++++ +++ +vi++v+ +++ P++Lp      e+ wyf           + +nr ++ g+W   g+ +e++  +    g  +t
  Eucgr.F01536.1.p  20 ELF-KFMFCMARADFFPA-NVITDVNPFNCLPETLP------ENTWYFTN---------SMENRGAEGGFWMPRGEAREIFG-DAFINGWEET 94 
                       554.55555556666667.889*************9......46788743.........356898899**************.9999****** PP

               NAM 106 LvfykgrapkgektdWvmheyrl 128
                         fy+gr pk ekt+W+m ey +
  Eucgr.F01536.1.p  95 HEFYEGRGPKVEKTNWLMLEYYM 117
                       *********************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.3778140IPR003441NAC domain
SuperFamilySSF1019416.28E-2125140IPR003441NAC domain
PfamPF023653.7E-544116IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MCPPAVAPLF DIKNISSNEE LFKFMFCMAR ADFFPANVIT DVNPFNCLPE TLPENTWYFT  60
NSMENRGAEG GFWMPRGEAR EIFGDAFING WEETHEFYEG RGPKVEKTNW LMLEYYMTSK  120
VSGAALSAKD AKSLCKVFRS GSLPVSNSEM LQHAAGTEFR RENYLYSLSP DNFNIPTKQC  180
VTNQMQVNTT SCNILRRASS FFLSHPIESL PELDHIDPGD YLELLDLGIP QSPSSQSDNS  240
SCMTMLSDEI FDYLVAMLES EVESGEHVEH RDADCNLNVT DSSKPDDVVV QAAISGLPIE  300
EKSSQNARDG KPVNRDGSPP LTLASQSRQL SDSRQTPSAD GRNKADGSFE YMKHQLDAVS  360
LGKTCMVQLH QRRFGDKFWA YDGPTFLFLC LWTLSNASDW TLSSTAFWEA LSSRSLETIL  420
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F01536.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060915.10.0PREDICTED: NAC domain-containing protein 79
TrEMBLA0A059BPI20.0A0A059BPI2_EUCGR; Uncharacterized protein
STRINGXP_010060915.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137081023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.13e-16NAC domain containing protein 58